Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRP rs17749927 chr6:27669976 A/G 1.21E-8 288 25.58 29.2 9.77 KM Plot
KIRP rs17750424 chr6:27701122 T/C 1.21E-8 289 25.58 28.68 9.77 KM Plot
KIRP rs17750747 chr6:27730334 T/C 1.3E-8 288 25.6 28.68 9.77 KM Plot
KIRP rs17751184 chr6:27775028 C/T 1.23E-8 289 25.62 27.78 9.77 KM Plot
KIRP rs17755379 chr19:33250683 A/G 3.42E-8 279 26.1 24.8 8.07 KM Plot
KIRP rs17763089 chr6:27835218 G/A 1.23E-8 289 25.62 27.78 9.77 KM Plot
KIRP rs17767863 chr21:44229698 T/A 0.000162 286 25.53 43.53 13.07 KM Plot
KIRP rs17767869 chr21:44230446 A/G 0.000176 289 25.53 40.7 13.07 KM Plot
KIRP rs17767995 chr21:44299148 C/T 0.000151 289 25.58 40.7 13.07 KM Plot
KIRP rs17772181 chr18:38824953 A/G 3.61E-5 289 18.38 32.95 25.5 KM Plot
KIRP rs17790156 chr11:46905318 A/T 0 282 25.65 28.03 9 KM Plot
KIRP rs17790246 chr11:47071513 C/T 7.93E-12 288 25.57 28.03 10.82 KM Plot
KIRP rs17790306 chr11:47089690 C/T 9.01E-12 287 25.57 29.8 10.82 KM Plot
KIRP rs17790336 chr11:47127549 G/T 7.59E-7 288 25.4 32.17 12.63 KM Plot
KIRP rs17790342 chr11:47127706 G/A 7.35E-12 288 25.4 31.87 10.82 KM Plot